Explore the results of the integration analysis between miRNAs and genes
Source:R/AllGenerics.R
integration.RdAfter performing the integration analysis between miRNA and gene expression
values with the mirnaIntegration() function, the results are stored
in the integration slot of a
MirnaExperiment object and can be explored with
this function.
Arguments
- object
A
MirnaExperimentobject containing miRNA and gene data- param
Logical, whether to return the complete
listobject with the parameters used, or just the results stored indata. Default is FALSE
Value
If param is FALSE, then this functions returns a data.frame object
containing the results of the integration analysis. Otherwise, a list
object including the parameters used for the analysis will be returned.
Author
Jacopo Ronchi, jacopo.ronchi@unimib.it
Examples
# load example MirnaExperiment object
obj <- loadExamples()
# visualize the results of correlation analysis
res <- integration(obj)
res
#> microRNA Target microRNA.Direction
#> hsa.miR.1179.7 hsa-miR-1179 ITGA6 downregulated
#> hsa.miR.1179.10 hsa-miR-1179 RBMS2 downregulated
#> hsa.miR.1179.12 hsa-miR-1179 SPIRE1 downregulated
#> hsa.miR.1179.14 hsa-miR-1179 TAF5 downregulated
#> hsa.miR.1275.1 hsa-miR-1275 CCND2 downregulated
#> hsa.miR.1275.2 hsa-miR-1275 CD44 downregulated
#> hsa.miR.1275.7 hsa-miR-1275 ITGA3 downregulated
#> hsa.miR.1275.8 hsa-miR-1275 LLGL1 downregulated
#> hsa.miR.1275.9 hsa-miR-1275 MDK downregulated
#> hsa.miR.1275.10 hsa-miR-1275 NAB2 downregulated
#> hsa.miR.1275.11 hsa-miR-1275 NUMB downregulated
#> hsa.miR.1275.14 hsa-miR-1275 THRA downregulated
#> hsa.miR.1275.16 hsa-miR-1275 TNNI1 downregulated
#> hsa.miR.138.1.3p hsa-miR-138-1-3p CCDC18 downregulated
#> hsa.miR.138.1.3p.1 hsa-miR-138-1-3p CCND2 downregulated
#> hsa.miR.138.1.3p.8 hsa-miR-138-1-3p LRP2BP downregulated
#> hsa.miR.138.1.3p.11 hsa-miR-138-1-3p TNNI1 downregulated
#> hsa.miR.138.1.3p.14 hsa-miR-138-1-3p ZNF276 downregulated
#> hsa.miR.138.5p.1 hsa-miR-138-5p ATG9B downregulated
#> hsa.miR.138.5p.2 hsa-miR-138-5p CD44 downregulated
#> hsa.miR.138.5p.3 hsa-miR-138-5p CLCN2 downregulated
#> hsa.miR.138.5p.7 hsa-miR-138-5p DTX4 downregulated
#> hsa.miR.138.5p.9 hsa-miR-138-5p OGG1 downregulated
#> hsa.miR.138.5p.11 hsa-miR-138-5p RBBP4 downregulated
#> hsa.miR.138.5p.14 hsa-miR-138-5p VPS37A downregulated
#> hsa.miR.139.5p.3 hsa-miR-139-5p CCND2 downregulated
#> hsa.miR.139.5p.5 hsa-miR-139-5p ECE1 downregulated
#> hsa.miR.139.5p.6 hsa-miR-139-5p FN1 downregulated
#> hsa.miR.139.5p.8 hsa-miR-139-5p ITGA3 downregulated
#> hsa.miR.139.5p.15 hsa-miR-139-5p SPIRE1 downregulated
#> hsa.miR.139.5p.17 hsa-miR-139-5p TSPAN3 downregulated
#> hsa.miR.144.3p.4 hsa-miR-144-3p DCBLD2 downregulated
#> hsa.miR.144.3p.26 hsa-miR-144-3p TSPAN3 downregulated
#> hsa.miR.144.5p.7 hsa-miR-144-5p TAF5 downregulated
#> hsa.miR.146b.3p.1 hsa-miR-146b-3p BCL2 upregulated
#> hsa.miR.146b.3p.9 hsa-miR-146b-3p JMJD4 upregulated
#> hsa.miR.146b.3p.10 hsa-miR-146b-3p LIMD1 upregulated
#> hsa.miR.146b.3p.11 hsa-miR-146b-3p MED12L upregulated
#> hsa.miR.146b.3p.13 hsa-miR-146b-3p PAX8 upregulated
#> hsa.miR.146b.3p.15 hsa-miR-146b-3p SORBS2 upregulated
#> hsa.miR.146b.3p.16 hsa-miR-146b-3p SPTBN1 upregulated
#> hsa.miR.146b.3p.17 hsa-miR-146b-3p TAF9B upregulated
#> hsa.miR.146b.3p.22 hsa-miR-146b-3p ZFP36L2 upregulated
#> hsa.miR.146b.3p.23 hsa-miR-146b-3p ZMYND11 upregulated
#> hsa.miR.146b.5p hsa-miR-146b-5p ANKRD28 upregulated
#> hsa.miR.146b.5p.2 hsa-miR-146b-5p CD24 upregulated
#> hsa.miR.146b.5p.3 hsa-miR-146b-5p CUL5 upregulated
#> hsa.miR.146b.5p.4 hsa-miR-146b-5p CYBRD1 upregulated
#> hsa.miR.146b.5p.5 hsa-miR-146b-5p DIO2 upregulated
#> hsa.miR.146b.5p.6 hsa-miR-146b-5p EGR1 upregulated
#> hsa.miR.146b.5p.7 hsa-miR-146b-5p FBXL3 upregulated
#> hsa.miR.146b.5p.8 hsa-miR-146b-5p FHL1 upregulated
#> hsa.miR.146b.5p.10 hsa-miR-146b-5p HYOU1 upregulated
#> hsa.miR.146b.5p.15 hsa-miR-146b-5p PAX8 upregulated
#> hsa.miR.146b.5p.16 hsa-miR-146b-5p SMAD2 upregulated
#> hsa.miR.146b.5p.17 hsa-miR-146b-5p SPTBN1 upregulated
#> hsa.miR.146b.5p.18 hsa-miR-146b-5p TAF9B upregulated
#> hsa.miR.182.5p hsa-miR-182-5p BCL2 upregulated
#> hsa.miR.182.5p.2 hsa-miR-182-5p CITED2 upregulated
#> hsa.miR.182.5p.3 hsa-miR-182-5p CUL5 upregulated
#> hsa.miR.182.5p.4 hsa-miR-182-5p FHL1 upregulated
#> hsa.miR.182.5p.8 hsa-miR-182-5p SDC2 upregulated
#> hsa.miR.182.5p.10 hsa-miR-182-5p SPTBN1 upregulated
#> hsa.miR.182.5p.12 hsa-miR-182-5p TOB1 upregulated
#> hsa.miR.183.5p.6 hsa-miR-183-5p EZR upregulated
#> hsa.miR.183.5p.7 hsa-miR-183-5p HNRNPM upregulated
#> hsa.miR.183.5p.11 hsa-miR-183-5p MED12L upregulated
#> hsa.miR.204.5p.1 hsa-miR-204-5p CCND2 downregulated
#> hsa.miR.204.5p.2 hsa-miR-204-5p CD44 downregulated
#> hsa.miR.204.5p.3 hsa-miR-204-5p DTX4 downregulated
#> hsa.miR.204.5p.8 hsa-miR-204-5p HLA-DRB5 downregulated
#> hsa.miR.204.5p.10 hsa-miR-204-5p RHOBTB2 downregulated
#> hsa.miR.204.5p.11 hsa-miR-204-5p SLA2 downregulated
#> hsa.miR.204.5p.13 hsa-miR-204-5p STAT6 downregulated
#> hsa.miR.204.5p.14 hsa-miR-204-5p TAF5 downregulated
#> hsa.miR.21.3p hsa-miR-21-3p CANX upregulated
#> hsa.miR.21.3p.1 hsa-miR-21-3p CUL5 upregulated
#> hsa.miR.21.3p.2 hsa-miR-21-3p DIO2 upregulated
#> hsa.miR.21.3p.3 hsa-miR-21-3p GJA1 upregulated
#> hsa.miR.21.3p.7 hsa-miR-21-3p SDC2 upregulated
#> hsa.miR.21.3p.8 hsa-miR-21-3p SMARCA2 upregulated
#> hsa.miR.21.5p hsa-miR-21-5p AIF1L upregulated
#> hsa.miR.21.5p.1 hsa-miR-21-5p ANKRD28 upregulated
#> hsa.miR.21.5p.3 hsa-miR-21-5p APAF1 upregulated
#> hsa.miR.21.5p.4 hsa-miR-21-5p ARHGAP24 upregulated
#> hsa.miR.21.5p.5 hsa-miR-21-5p BCL2 upregulated
#> hsa.miR.21.5p.6 hsa-miR-21-5p CYBRD1 upregulated
#> hsa.miR.21.5p.8 hsa-miR-21-5p MATN2 upregulated
#> hsa.miR.21.5p.10 hsa-miR-21-5p MED12L upregulated
#> hsa.miR.21.5p.15 hsa-miR-21-5p TOB1 upregulated
#> hsa.miR.2110.1 hsa-miR-2110 AIF1L upregulated
#> hsa.miR.2110.3 hsa-miR-2110 CYBRD1 upregulated
#> hsa.miR.2110.9 hsa-miR-2110 MED12L upregulated
#> hsa.miR.2110.12 hsa-miR-2110 SMAD2 upregulated
#> hsa.miR.221.3p hsa-miR-221-3p ANKRD28 upregulated
#> hsa.miR.221.3p.2 hsa-miR-221-3p APAF1 upregulated
#> hsa.miR.221.3p.3 hsa-miR-221-3p BCL2 upregulated
#> hsa.miR.221.3p.6 hsa-miR-221-3p CUL5 upregulated
#> hsa.miR.221.3p.17 hsa-miR-221-3p SMARCA2 upregulated
#> hsa.miR.221.3p.18 hsa-miR-221-3p SPTBN1 upregulated
#> hsa.miR.221.3p.21 hsa-miR-221-3p URI1 upregulated
#> hsa.miR.221.5p hsa-miR-221-5p ANKRD28 upregulated
#> hsa.miR.221.5p.1 hsa-miR-221-5p APAF1 upregulated
#> hsa.miR.221.5p.6 hsa-miR-221-5p IYD upregulated
#> hsa.miR.221.5p.7 hsa-miR-221-5p LIMD1 upregulated
#> hsa.miR.221.5p.10 hsa-miR-221-5p URI1 upregulated
#> hsa.miR.222.3p hsa-miR-222-3p ANKRD28 upregulated
#> hsa.miR.222.3p.2 hsa-miR-222-3p APAF1 upregulated
#> hsa.miR.222.3p.4 hsa-miR-222-3p BCL2 upregulated
#> hsa.miR.222.3p.5 hsa-miR-222-3p CANX upregulated
#> hsa.miR.222.3p.9 hsa-miR-222-3p EZR upregulated
#> hsa.miR.222.3p.11 hsa-miR-222-3p GPBP1 upregulated
#> hsa.miR.222.3p.18 hsa-miR-222-3p SMARCA2 upregulated
#> hsa.miR.222.3p.22 hsa-miR-222-3p URI1 upregulated
#> hsa.miR.31.3p hsa-miR-31-3p CANX upregulated
#> hsa.miR.31.3p.1 hsa-miR-31-3p COL9A3 upregulated
#> hsa.miR.31.3p.2 hsa-miR-31-3p CUL5 upregulated
#> hsa.miR.31.3p.3 hsa-miR-31-3p LIMD1 upregulated
#> hsa.miR.31.3p.4 hsa-miR-31-3p MED12L upregulated
#> hsa.miR.31.3p.6 hsa-miR-31-3p SLC26A7 upregulated
#> hsa.miR.31.3p.7 hsa-miR-31-3p SMAD2 upregulated
#> hsa.miR.31.5p.2 hsa-miR-31-5p CUL5 upregulated
#> hsa.miR.31.5p.5 hsa-miR-31-5p GIGYF2 upregulated
#> hsa.miR.31.5p.6 hsa-miR-31-5p JUN upregulated
#> hsa.miR.31.5p.7 hsa-miR-31-5p MICA upregulated
#> hsa.miR.31.5p.10 hsa-miR-31-5p SPTBN1 upregulated
#> hsa.miR.34a.5p hsa-miR-34a-5p APAF1 upregulated
#> hsa.miR.34a.5p.1 hsa-miR-34a-5p BCL2 upregulated
#> hsa.miR.34a.5p.3 hsa-miR-34a-5p CD24 upregulated
#> hsa.miR.34a.5p.7 hsa-miR-34a-5p GIGYF2 upregulated
#> hsa.miR.34a.5p.9 hsa-miR-34a-5p LIMD1 upregulated
#> hsa.miR.34a.5p.13 hsa-miR-34a-5p SPTBN1 upregulated
#> hsa.miR.34a.5p.14 hsa-miR-34a-5p SYNE2 upregulated
#> hsa.miR.34a.5p.18 hsa-miR-34a-5p ZMYND11 upregulated
#> hsa.miR.3613.5p.3 hsa-miR-3613-5p MED12L upregulated
#> hsa.miR.3613.5p.4 hsa-miR-3613-5p PAPSS2 upregulated
#> hsa.miR.3613.5p.5 hsa-miR-3613-5p SLC26A4 upregulated
#> hsa.miR.3613.5p.6 hsa-miR-3613-5p SLC26A7 upregulated
#> hsa.miR.3613.5p.7 hsa-miR-3613-5p SYNE2 upregulated
#> hsa.miR.375.1 hsa-miR-375 BCL2 upregulated
#> hsa.miR.375.3 hsa-miR-375 DEK upregulated
#> hsa.miR.451a.2 hsa-miR-451a CCND2 downregulated
#> hsa.miR.451a.3 hsa-miR-451a DCBLD2 downregulated
#> hsa.miR.451a.7 hsa-miR-451a TNRC6C downregulated
#> hsa.miR.486.3p.3 hsa-miR-486-3p CCND2 downregulated
#> hsa.miR.486.3p.5 hsa-miR-486-3p EFHD2 downregulated
#> hsa.miR.486.3p.9 hsa-miR-486-3p LLGL1 downregulated
#> hsa.miR.486.5p hsa-miR-486-5p DCBLD2 downregulated
#> hsa.miR.486.5p.5 hsa-miR-486-5p RBMS2 downregulated
#> hsa.miR.504.5p.6 hsa-miR-504-5p LLGL1 downregulated
#> hsa.miR.504.5p.7 hsa-miR-504-5p LUC7L downregulated
#> hsa.miR.504.5p.9 hsa-miR-504-5p MTHFD2 downregulated
#> hsa.miR.504.5p.10 hsa-miR-504-5p NAB2 downregulated
#> hsa.miR.504.5p.11 hsa-miR-504-5p TNNI1 downregulated
#> hsa.miR.551b.3p hsa-miR-551b-3p AIF1L upregulated
#> hsa.miR.551b.3p.3 hsa-miR-551b-3p GIGYF2 upregulated
#> hsa.miR.551b.3p.4 hsa-miR-551b-3p GPBP1 upregulated
#> hsa.miR.551b.3p.8 hsa-miR-551b-3p IYD upregulated
#> hsa.miR.551b.3p.10 hsa-miR-551b-3p NUPR1 upregulated
#> hsa.miR.551b.3p.12 hsa-miR-551b-3p RYR2 upregulated
#> hsa.miR.551b.3p.13 hsa-miR-551b-3p SMARCA2 upregulated
#> hsa.miR.551b.3p.14 hsa-miR-551b-3p SMPD4 upregulated
#> hsa.miR.577 hsa-miR-577 AGK downregulated
#> hsa.miR.577.4 hsa-miR-577 CD44 downregulated
#> hsa.miR.577.8 hsa-miR-577 LMO3 downregulated
#> hsa.miR.577.9 hsa-miR-577 LRP2BP downregulated
#> hsa.miR.577.10 hsa-miR-577 MTHFD2 downregulated
#> hsa.miR.577.17 hsa-miR-577 WSB2 downregulated
#> hsa.miR.652.3p.4 hsa-miR-652-3p CCND2 downregulated
#> hsa.miR.652.3p.6 hsa-miR-652-3p EFHD2 downregulated
#> hsa.miR.652.3p.11 hsa-miR-652-3p LLGL1 downregulated
#> hsa.miR.652.3p.12 hsa-miR-652-3p LMO3 downregulated
#> hsa.miR.652.3p.13 hsa-miR-652-3p MGST1 downregulated
#> hsa.miR.652.3p.18 hsa-miR-652-3p VPS37A downregulated
#> hsa.miR.652.3p.20 hsa-miR-652-3p ZFP36L1 downregulated
#> hsa.miR.653.5p.1 hsa-miR-653-5p BCL2 upregulated
#> hsa.miR.653.5p.3 hsa-miR-653-5p CITED2 upregulated
#> hsa.miR.653.5p.6 hsa-miR-653-5p DIO2 upregulated
#> hsa.miR.653.5p.10 hsa-miR-653-5p HYOU1 upregulated
#> hsa.miR.653.5p.12 hsa-miR-653-5p IYD upregulated
#> hsa.miR.653.5p.15 hsa-miR-653-5p NECAB1 upregulated
#> hsa.miR.653.5p.21 hsa-miR-653-5p SMAD2 upregulated
#> hsa.miR.653.5p.22 hsa-miR-653-5p URI1 upregulated
#> hsa.miR.6842.3p.4 hsa-miR-6842-3p LIMD1 upregulated
#> hsa.miR.6842.3p.7 hsa-miR-6842-3p SLC26A7 upregulated
#> hsa.miR.7.5p.6 hsa-miR-7-5p CCND2 downregulated
#> hsa.miR.873.3p hsa-miR-873-3p CCND2 downregulated
#> hsa.miR.873.3p.1 hsa-miR-873-3p CD44 downregulated
#> hsa.miR.873.3p.7 hsa-miR-873-3p RBBP4 downregulated
#> hsa.miR.873.3p.10 hsa-miR-873-3p SYTL4 downregulated
#> hsa.miR.873.3p.12 hsa-miR-873-3p VPS37A downregulated
#> hsa.miR.873.5p.1 hsa-miR-873-5p DDR1 downregulated
#> hsa.miR.873.5p.7 hsa-miR-873-5p NPEPPS downregulated
#> hsa.miR.873.5p.11 hsa-miR-873-5p RBMS2 downregulated
#> hsa.miR.874.3p.5 hsa-miR-874-3p CCND2 downregulated
#> hsa.miR.874.3p.6 hsa-miR-874-3p ECE1 downregulated
#> hsa.miR.874.3p.7 hsa-miR-874-3p FZD4 downregulated
#> hsa.miR.874.3p.11 hsa-miR-874-3p S100A13 downregulated
#> hsa.miR.874.3p.15 hsa-miR-874-3p THRA downregulated
#> hsa.miR.874.3p.16 hsa-miR-874-3p TNNI1 downregulated
#> hsa.miR.874.3p.17 hsa-miR-874-3p TNRC6C downregulated
#> hsa.miR.9.5p.2 hsa-miR-9-5p C1orf56 downregulated
#> hsa.miR.9.5p.3 hsa-miR-9-5p DCBLD2 downregulated
#> hsa.miR.9.5p.9 hsa-miR-9-5p MTHFD2 downregulated
#> hsa.miR.9.5p.12 hsa-miR-9-5p SIX5 downregulated
#> hsa.miR.96.5p.1 hsa-miR-96-5p ARHGAP24 upregulated
#> hsa.miR.96.5p.2 hsa-miR-96-5p BCL2 upregulated
#> hsa.miR.96.5p.3 hsa-miR-96-5p CAV1 upregulated
#> hsa.miR.96.5p.5 hsa-miR-96-5p DEK upregulated
#> hsa.miR.96.5p.8 hsa-miR-96-5p EZR upregulated
#> hsa.miR.96.5p.9 hsa-miR-96-5p FHL1 upregulated
#> hsa.miR.96.5p.15 hsa-miR-96-5p MED12L upregulated
#> hsa.miR.96.5p.18 hsa-miR-96-5p SDC2 upregulated
#> hsa.miR.96.5p.19 hsa-miR-96-5p SLC26A4 upregulated
#> hsa.miR.96.5p.20 hsa-miR-96-5p SYNE2 upregulated
#> Corr.Coefficient Corr.P.Value Corr.Adjusted.P.Val
#> hsa.miR.1179.7 -0.8617647 8.902592e-06 6.579303e-04
#> hsa.miR.1179.10 -0.7764706 2.021754e-04 3.484055e-03
#> hsa.miR.1179.12 -0.7117647 9.920216e-04 7.248522e-03
#> hsa.miR.1179.14 -0.5970588 7.304866e-03 2.668766e-02
#> hsa.miR.1275.1 -0.7794118 1.858401e-04 3.484055e-03
#> hsa.miR.1275.2 -0.8382353 2.505171e-05 1.342354e-03
#> hsa.miR.1275.7 -0.5647059 1.133160e-02 3.755784e-02
#> hsa.miR.1275.8 -0.6676471 2.355991e-03 1.165309e-02
#> hsa.miR.1275.9 -0.6823529 1.793985e-03 9.944246e-03
#> hsa.miR.1275.10 -0.7264706 7.180913e-04 5.996529e-03
#> hsa.miR.1275.11 -0.6705882 2.233604e-03 1.130872e-02
#> hsa.miR.1275.14 -0.5735294 1.009552e-02 3.490010e-02
#> hsa.miR.1275.16 -0.6852941 1.695781e-03 9.649443e-03
#> hsa.miR.138.1.3p -0.6235294 4.927825e-03 2.044253e-02
#> hsa.miR.138.1.3p.1 -0.8941176 1.505655e-06 2.420340e-04
#> hsa.miR.138.1.3p.8 -0.5529412 1.315725e-02 4.147114e-02
#> hsa.miR.138.1.3p.11 -0.7764706 2.021754e-04 3.484055e-03
#> hsa.miR.138.1.3p.14 -0.5676471 1.090730e-02 3.691259e-02
#> hsa.miR.138.5p.1 -0.5647059 1.133160e-02 3.755784e-02
#> hsa.miR.138.5p.2 -0.7176471 8.737675e-04 6.688482e-03
#> hsa.miR.138.5p.3 -0.7029412 1.193476e-03 7.993805e-03
#> hsa.miR.138.5p.7 -0.7441176 4.741414e-04 4.917305e-03
#> hsa.miR.138.5p.9 -0.7705882 2.384112e-04 3.484055e-03
#> hsa.miR.138.5p.11 -0.5970588 7.304866e-03 2.668766e-02
#> hsa.miR.138.5p.14 -0.6735294 2.116370e-03 1.080020e-02
#> hsa.miR.139.5p.3 -0.5588235 1.221826e-02 3.967848e-02
#> hsa.miR.139.5p.5 -0.6205882 5.156758e-03 2.046787e-02
#> hsa.miR.139.5p.6 -0.6970588 1.345295e-03 8.317543e-03
#> hsa.miR.139.5p.8 -0.6794118 1.896716e-03 1.042383e-02
#> hsa.miR.139.5p.15 -0.5705882 1.049535e-02 3.608828e-02
#> hsa.miR.139.5p.17 -0.5411765 1.520011e-02 4.654129e-02
#> hsa.miR.144.3p.4 -0.6852941 1.695781e-03 9.649443e-03
#> hsa.miR.144.3p.26 -0.6147059 5.639737e-03 2.184549e-02
#> hsa.miR.144.5p.7 -0.7058824 1.122950e-03 7.934693e-03
#> hsa.miR.146b.3p.1 -0.8294118 3.544227e-05 1.498483e-03
#> hsa.miR.146b.3p.9 -0.6823529 1.793985e-03 9.944246e-03
#> hsa.miR.146b.3p.10 -0.6911765 1.512359e-03 8.840428e-03
#> hsa.miR.146b.3p.11 -0.6470588 3.371039e-03 1.548270e-02
#> hsa.miR.146b.3p.13 -0.6764706 2.004126e-03 1.047685e-02
#> hsa.miR.146b.3p.15 -0.8264706 3.961774e-05 1.498483e-03
#> hsa.miR.146b.3p.16 -0.8500000 1.526130e-05 8.920924e-04
#> hsa.miR.146b.3p.17 -0.6205882 5.156758e-03 2.046787e-02
#> hsa.miR.146b.3p.22 -0.5911765 7.937790e-03 2.835555e-02
#> hsa.miR.146b.3p.23 -0.7264706 7.180913e-04 5.996529e-03
#> hsa.miR.146b.5p -0.8235294 4.419570e-05 1.578769e-03
#> hsa.miR.146b.5p.2 -0.7117647 9.920216e-04 7.248522e-03
#> hsa.miR.146b.5p.3 -0.6852941 1.695781e-03 9.649443e-03
#> hsa.miR.146b.5p.4 -0.8029412 9.025840e-05 2.418173e-03
#> hsa.miR.146b.5p.5 -0.7029412 1.193476e-03 7.993805e-03
#> hsa.miR.146b.5p.6 -0.5382353 1.574661e-02 4.775978e-02
#> hsa.miR.146b.5p.7 -0.5529412 1.315725e-02 4.147114e-02
#> hsa.miR.146b.5p.8 -0.7176471 8.737675e-04 6.688482e-03
#> hsa.miR.146b.5p.10 -0.8264706 3.961774e-05 1.498483e-03
#> hsa.miR.146b.5p.15 -0.7117647 9.920216e-04 7.248522e-03
#> hsa.miR.146b.5p.16 -0.5352941 1.630793e-02 4.877209e-02
#> hsa.miR.146b.5p.17 -0.8352941 2.818566e-05 1.394106e-03
#> hsa.miR.146b.5p.18 -0.6176471 5.393992e-03 2.114840e-02
#> hsa.miR.182.5p -0.8323529 3.164062e-05 1.453209e-03
#> hsa.miR.182.5p.2 -0.6676471 2.355991e-03 1.165309e-02
#> hsa.miR.182.5p.3 -0.6205882 5.156758e-03 2.046787e-02
#> hsa.miR.182.5p.4 -0.6411765 3.717210e-03 1.671445e-02
#> hsa.miR.182.5p.8 -0.5617647 1.176851e-02 3.860791e-02
#> hsa.miR.182.5p.10 -0.5352941 1.630793e-02 4.877209e-02
#> hsa.miR.182.5p.12 -0.7205882 8.190956e-04 6.502203e-03
#> hsa.miR.183.5p.6 -0.5882353 8.269861e-03 2.921715e-02
#> hsa.miR.183.5p.7 -0.6294118 4.494045e-03 1.939376e-02
#> hsa.miR.183.5p.11 -0.6823529 1.793985e-03 9.944246e-03
#> hsa.miR.204.5p.1 -0.8852941 2.573574e-06 3.266236e-04
#> hsa.miR.204.5p.2 -0.8088235 7.423780e-05 2.273091e-03
#> hsa.miR.204.5p.3 -0.7588235 3.270151e-04 4.043668e-03
#> hsa.miR.204.5p.8 -0.5941176 7.616200e-03 2.751245e-02
#> hsa.miR.204.5p.10 -0.9029412 8.388622e-07 2.420340e-04
#> hsa.miR.204.5p.11 -0.7205882 8.190956e-04 6.502203e-03
#> hsa.miR.204.5p.13 -0.8205882 4.920635e-05 1.665247e-03
#> hsa.miR.204.5p.14 -0.7205882 8.190956e-04 6.502203e-03
#> hsa.miR.21.3p -0.6617647 2.616877e-03 1.265152e-02
#> hsa.miR.21.3p.1 -0.7558824 3.529453e-04 4.281959e-03
#> hsa.miR.21.3p.2 -0.7647059 2.798381e-04 3.911651e-03
#> hsa.miR.21.3p.3 -0.5911765 7.937790e-03 2.835555e-02
#> hsa.miR.21.3p.7 -0.8617647 8.902592e-06 6.579303e-04
#> hsa.miR.21.3p.8 -0.6764706 2.004126e-03 1.047685e-02
#> hsa.miR.21.5p -0.7882353 1.432328e-04 3.076035e-03
#> hsa.miR.21.5p.1 -0.7970588 1.090490e-04 2.696867e-03
#> hsa.miR.21.5p.3 -0.7705882 2.384112e-04 3.484055e-03
#> hsa.miR.21.5p.4 -0.7882353 1.432328e-04 3.076035e-03
#> hsa.miR.21.5p.5 -0.7705882 2.384112e-04 3.484055e-03
#> hsa.miR.21.5p.6 -0.6764706 2.004126e-03 1.047685e-02
#> hsa.miR.21.5p.8 -0.9352941 5.360084e-08 3.446534e-05
#> hsa.miR.21.5p.10 -0.7323529 6.274791e-04 5.682663e-03
#> hsa.miR.21.5p.15 -0.7617647 3.026714e-04 4.043668e-03
#> hsa.miR.2110.1 -0.7705882 2.384112e-04 3.484055e-03
#> hsa.miR.2110.3 -0.6941176 1.426853e-03 8.574453e-03
#> hsa.miR.2110.9 -0.7823529 1.706104e-04 3.324317e-03
#> hsa.miR.2110.12 -0.6647059 2.483693e-03 1.209860e-02
#> hsa.miR.221.3p -0.6411765 3.717210e-03 1.671445e-02
#> hsa.miR.221.3p.2 -0.6970588 1.345295e-03 8.317543e-03
#> hsa.miR.221.3p.3 -0.7441176 4.741414e-04 4.917305e-03
#> hsa.miR.221.3p.6 -0.7617647 3.026714e-04 4.043668e-03
#> hsa.miR.221.3p.17 -0.7382353 5.464254e-04 5.323508e-03
#> hsa.miR.221.3p.18 -0.5500000 1.364699e-02 4.239136e-02
#> hsa.miR.221.3p.21 -0.7382353 5.464254e-04 5.323508e-03
#> hsa.miR.221.5p -0.5970588 7.304866e-03 2.668766e-02
#> hsa.miR.221.5p.1 -0.6911765 1.512359e-03 8.840428e-03
#> hsa.miR.221.5p.6 -0.7264706 7.180913e-04 5.996529e-03
#> hsa.miR.221.5p.7 -0.7941176 1.195955e-04 2.848144e-03
#> hsa.miR.221.5p.10 -0.6970588 1.345295e-03 8.317543e-03
#> hsa.miR.222.3p -0.6323529 4.288792e-03 1.863306e-02
#> hsa.miR.222.3p.2 -0.7000000 1.267547e-03 8.316662e-03
#> hsa.miR.222.3p.4 -0.7058824 1.122950e-03 7.934693e-03
#> hsa.miR.222.3p.5 -0.7411765 5.092348e-04 5.197428e-03
#> hsa.miR.222.3p.9 -0.6970588 1.345295e-03 8.317543e-03
#> hsa.miR.222.3p.11 -0.5500000 1.364699e-02 4.239136e-02
#> hsa.miR.222.3p.18 -0.7323529 6.274791e-04 5.682663e-03
#> hsa.miR.222.3p.22 -0.7176471 8.737675e-04 6.688482e-03
#> hsa.miR.31.3p -0.5382353 1.574661e-02 4.775978e-02
#> hsa.miR.31.3p.1 -0.5676471 1.090730e-02 3.691259e-02
#> hsa.miR.31.3p.2 -0.6235294 4.927825e-03 2.044253e-02
#> hsa.miR.31.3p.3 -0.6558824 2.900368e-03 1.381435e-02
#> hsa.miR.31.3p.4 -0.6500000 3.207853e-03 1.505584e-02
#> hsa.miR.31.3p.6 -0.6941176 1.426853e-03 8.574453e-03
#> hsa.miR.31.3p.7 -0.5558824 1.268109e-02 4.056686e-02
#> hsa.miR.31.5p.2 -0.6088235 6.157602e-03 2.342803e-02
#> hsa.miR.31.5p.5 -0.6029412 6.712063e-03 2.523893e-02
#> hsa.miR.31.5p.6 -0.6470588 3.371039e-03 1.548270e-02
#> hsa.miR.31.5p.7 -0.6764706 2.004126e-03 1.047685e-02
#> hsa.miR.31.5p.10 -0.7294118 6.715393e-04 5.915066e-03
#> hsa.miR.34a.5p -0.7970588 1.090490e-04 2.696867e-03
#> hsa.miR.34a.5p.1 -0.8588235 1.023220e-05 6.579303e-04
#> hsa.miR.34a.5p.3 -0.5529412 1.315725e-02 4.147114e-02
#> hsa.miR.34a.5p.7 -0.5941176 7.616200e-03 2.751245e-02
#> hsa.miR.34a.5p.9 -0.6235294 4.927825e-03 2.044253e-02
#> hsa.miR.34a.5p.13 -0.6911765 1.512359e-03 8.840428e-03
#> hsa.miR.34a.5p.14 -0.6264706 4.706989e-03 1.991180e-02
#> hsa.miR.34a.5p.18 -0.6205882 5.156758e-03 2.046787e-02
#> hsa.miR.3613.5p.3 -0.8823529 3.047810e-06 3.266236e-04
#> hsa.miR.3613.5p.4 -0.7823529 1.706104e-04 3.324317e-03
#> hsa.miR.3613.5p.5 -0.6970588 1.345295e-03 8.317543e-03
#> hsa.miR.3613.5p.6 -0.6941176 1.426853e-03 8.574453e-03
#> hsa.miR.3613.5p.7 -0.5647059 1.133160e-02 3.755784e-02
#> hsa.miR.375.1 -0.5617647 1.176851e-02 3.860791e-02
#> hsa.miR.375.3 -0.7323529 6.274791e-04 5.682663e-03
#> hsa.miR.451a.2 -0.8088235 7.423780e-05 2.273091e-03
#> hsa.miR.451a.3 -0.6676471 2.355991e-03 1.165309e-02
#> hsa.miR.451a.7 -0.6117647 5.894203e-03 2.269444e-02
#> hsa.miR.486.3p.3 -0.5588235 1.221826e-02 3.967848e-02
#> hsa.miR.486.3p.5 -0.6735294 2.116370e-03 1.080020e-02
#> hsa.miR.486.3p.9 -0.7088235 1.055841e-03 7.628152e-03
#> hsa.miR.486.5p -0.6323529 4.288792e-03 1.863306e-02
#> hsa.miR.486.5p.5 -0.5676471 1.090730e-02 3.691259e-02
#> hsa.miR.504.5p.6 -0.7588235 3.270151e-04 4.043668e-03
#> hsa.miR.504.5p.7 -0.5441176 1.466817e-02 4.534439e-02
#> hsa.miR.504.5p.9 -0.5852941 8.612643e-03 3.026191e-02
#> hsa.miR.504.5p.10 -0.6264706 4.706989e-03 1.991180e-02
#> hsa.miR.504.5p.11 -0.5970588 7.304866e-03 2.668766e-02
#> hsa.miR.551b.3p -0.7382353 5.464254e-04 5.323508e-03
#> hsa.miR.551b.3p.3 -0.5735294 1.009552e-02 3.490010e-02
#> hsa.miR.551b.3p.4 -0.8588235 1.023220e-05 6.579303e-04
#> hsa.miR.551b.3p.8 -0.7000000 1.267547e-03 8.316662e-03
#> hsa.miR.551b.3p.10 -0.7235294 7.672406e-04 6.324817e-03
#> hsa.miR.551b.3p.12 -0.7881698 1.435164e-04 3.076035e-03
#> hsa.miR.551b.3p.13 -0.7705882 2.384112e-04 3.484055e-03
#> hsa.miR.551b.3p.14 -0.7676471 2.584418e-04 3.692846e-03
#> hsa.miR.577 -0.6352941 4.091032e-03 1.814161e-02
#> hsa.miR.577.4 -0.6470588 3.371039e-03 1.548270e-02
#> hsa.miR.577.8 -0.6764706 2.004126e-03 1.047685e-02
#> hsa.miR.577.9 -0.7029412 1.193476e-03 7.993805e-03
#> hsa.miR.577.10 -0.5500000 1.364699e-02 4.239136e-02
#> hsa.miR.577.17 -0.6558824 2.900368e-03 1.381435e-02
#> hsa.miR.652.3p.4 -0.8058824 8.192333e-05 2.394396e-03
#> hsa.miR.652.3p.6 -0.6500000 3.207853e-03 1.505584e-02
#> hsa.miR.652.3p.11 -0.7264706 7.180913e-04 5.996529e-03
#> hsa.miR.652.3p.12 -0.7117647 9.920216e-04 7.248522e-03
#> hsa.miR.652.3p.13 -0.7441176 4.741414e-04 4.917305e-03
#> hsa.miR.652.3p.18 -0.6147059 5.639737e-03 2.184549e-02
#> hsa.miR.652.3p.20 -0.6411765 3.717210e-03 1.671445e-02
#> hsa.miR.653.5p.1 -0.7470588 4.410535e-04 4.889610e-03
#> hsa.miR.653.5p.3 -0.6205882 5.156758e-03 2.046787e-02
#> hsa.miR.653.5p.6 -0.6323529 4.288792e-03 1.863306e-02
#> hsa.miR.653.5p.10 -0.7588235 3.270151e-04 4.043668e-03
#> hsa.miR.653.5p.12 -0.6647059 2.483693e-03 1.209860e-02
#> hsa.miR.653.5p.15 -0.6764706 2.004126e-03 1.047685e-02
#> hsa.miR.653.5p.21 -0.5352941 1.630793e-02 4.877209e-02
#> hsa.miR.653.5p.22 -0.6205882 5.156758e-03 2.046787e-02
#> hsa.miR.6842.3p.4 -0.7441176 4.741414e-04 4.917305e-03
#> hsa.miR.6842.3p.7 -0.5411765 1.520011e-02 4.654129e-02
#> hsa.miR.7.5p.6 -0.6735294 2.116370e-03 1.080020e-02
#> hsa.miR.873.3p -0.8970588 1.246188e-06 2.420340e-04
#> hsa.miR.873.3p.1 -0.7323529 6.274791e-04 5.682663e-03
#> hsa.miR.873.3p.7 -0.7852941 1.564270e-04 3.244598e-03
#> hsa.miR.873.3p.10 -0.7352941 5.858078e-04 5.622006e-03
#> hsa.miR.873.3p.12 -0.6176471 5.393992e-03 2.114840e-02
#> hsa.miR.873.5p.1 -0.7294118 6.715393e-04 5.915066e-03
#> hsa.miR.873.5p.7 -0.7470588 4.410535e-04 4.889610e-03
#> hsa.miR.873.5p.11 -0.7705882 2.384112e-04 3.484055e-03
#> hsa.miR.874.3p.5 -0.7500000 4.098820e-04 4.880632e-03
#> hsa.miR.874.3p.6 -0.7764706 2.021754e-04 3.484055e-03
#> hsa.miR.874.3p.7 -0.5558824 1.268109e-02 4.056686e-02
#> hsa.miR.874.3p.11 -0.5558824 1.268109e-02 4.056686e-02
#> hsa.miR.874.3p.15 -0.7470588 4.410535e-04 4.889610e-03
#> hsa.miR.874.3p.16 -0.6088235 6.157602e-03 2.342803e-02
#> hsa.miR.874.3p.17 -0.7705882 2.384112e-04 3.484055e-03
#> hsa.miR.9.5p.2 -0.7029412 1.193476e-03 7.993805e-03
#> hsa.miR.9.5p.3 -0.5647059 1.133160e-02 3.755784e-02
#> hsa.miR.9.5p.9 -0.6205882 5.156758e-03 2.046787e-02
#> hsa.miR.9.5p.12 -0.7470588 4.410535e-04 4.889610e-03
#> hsa.miR.96.5p.1 -0.6058824 6.430149e-03 2.432109e-02
#> hsa.miR.96.5p.2 -0.8029412 9.025840e-05 2.418173e-03
#> hsa.miR.96.5p.3 -0.6264706 4.706989e-03 1.991180e-02
#> hsa.miR.96.5p.5 -0.7588235 3.270151e-04 4.043668e-03
#> hsa.miR.96.5p.8 -0.7029412 1.193476e-03 7.993805e-03
#> hsa.miR.96.5p.9 -0.6970588 1.345295e-03 8.317543e-03
#> hsa.miR.96.5p.15 -0.6352941 4.091032e-03 1.814161e-02
#> hsa.miR.96.5p.18 -0.5882353 8.269861e-03 2.921715e-02
#> hsa.miR.96.5p.19 -0.6000000 7.003561e-03 2.618192e-02
#> hsa.miR.96.5p.20 -0.5823529 8.966367e-03 3.133355e-02