Access the miRNA-augmented pathways that were used during TAIPA

This function accesses the pathways slot of a FunctionalEnrichment object and returns a list object with the augmented pathways that were considered by the topologicalAnalysis() function to perform the integrative analysis.

Usage

augmentedPathways(object)

Arguments

object

An object of class IntegrativePathwayAnalysis containing the results of a miRNA-mRNA pathway analysis

Value

A list object with the miRNA-augmented biological pathways.

Author

Jacopo Ronchi, jacopo.ronchi@unimib.it

Examples

# load the example IntegrativePathwayAnalysis object
obj <- loadExamples("IntegrativePathwayAnalysis")

# extract the pathways
ps <- augmentedPathways(obj)